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Ccch gene family

WebNov 23, 2024 · Gene collinearity and duplication of CCCH in B. napus. Most CCCH orthologous genes in B. rapa and B. oleracea remain as homeologous gene pairs in B. napus.There are 24 collinearity CCCH gene pairs only in subgenome A, 16 collinearity CCCH gene pairs only in subgenome C, and 92 collinearity CCCH gene pairs between … WebJan 27, 2008 · Background: Genes in the CCCH family encode zinc finger proteins containing the motif with three cysteines and one histidine residues. They have …

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WebMar 15, 2024 · Phylogenetic analysis categorized the barley CCCH genes (HvC3Hs) into eleven subfamilies according to their distinct features, and this classification was … WebMay 29, 2014 · Gene structure and protein motif analysis of the CCCH genes. To explore the gene structures of the CCCH genes in tomato, we compared the predicted coding … chef guo new york https://sanda-smartpower.com

Full article: Genome-wide identification of the CCCH gene family …

WebGenome-wide identification of the CCCH gene family in rose ( Rosa chinensis Jacq.) reveals its potential functions. Article. Full-text available. Mar 2024; BIOTECHNOL BIOTEC EQ; Cai-hua Li; WebFeb 25, 2015 · Comprehensive analysis of CCCH-type zinc finger family genes facilitates functional gene discovery and reflects recent allopolyploidization event in tetraploid switchgrass Authors Shaoxun Yuan 1 , Bin Xu 2 , Jing Zhang 3 , Zheni Xie 4 , Qiang Cheng 5 , Zhimin Yang 6 , Qingsheng Cai 7 , Bingru Huang 8 Affiliations WebArginine-rich Tandem Zinc Finger (RR-TZF) proteins make up a plant-specific superfamily that participates in plant development, while their roles in cotton fiber development remain to be explored. In this study, we identified an RR-TZF protein-coding gene, GhTZF2, containing two CCCH domains (C-X7-C-X5-C-X3-H-X16-C-X5-C-X4-C-X3-H) and one … chef guntas

Comprehensive analysis of CCCH zinc finger family in poplar

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Ccch gene family

Comprehensive analysis of CCCH-type zinc finger gene family in …

WebJan 5, 2013 · Among the different types of zinc finger proteins, the CCCH proteins are a large family containing 1–6 copies of CCCH-type motifs. A genome-wide analysis of the CCCH gene family identified a total of 68, 67, 68, and 91 CCCH genes in Arabidopsis, Oryza sativa (Wang et al. 2008), maize (Peng et al. 2012), and Populus (Chai et al. 2012 ... WebNov 1, 2024 · On the basis of a typical CCCH motif (PF00642 and Sm00356) in members of the C3H gene family (Chai et al., 2012; Peng et al., 2012; Zhang et al., 2013; Liu et al., 2014; Xu, 2014; Pradhan et al., 2024), we identified 88 TaC3H genes in common wheat, named TaC3H1–TaC3H88 (Table 1).

Ccch gene family

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WebJul 7, 2024 · CCCH is a subfamily of zinc finger proteins involved in plant growth, development, and stresses response. The function of CCCH in regulating leaf senescence, especially its roles in abscisic... WebMar 25, 2024 · Conclusions: PvC3H72 was the first characterized switchgrass cold-tolerance gene and also the only Znf-CCCH family gene known as a transcription factor in plant cold tolerance. PvC3H72 was an ...

WebJul 12, 2024 · The CCCH zinc finger is a group of proteins characterised by a typical motif consisting of three cysteine residues and one histidine residue. These proteins have been reported to play important roles in regulation of plant growth, developmental processes and environmental responses. In the present study, genome wide analysis of the CCCH … WebCCCH gene function in Pinus massoniana Lamb. Alibaba Super StarT Entrepreneurial Channel-Live-streams Alibaba Group 2024 年 2 月 - 至今 2 年 3 个月. Hangzhou, Zhejiang, Chine ... the LBD gene family of P. massoniana by systematic gene structure and functional evolutionary analysis. We obtained 47 LBD gene family members, and all …

WebApr 13, 2024 · Zinc finger CCCH domain-containing protein 13 ... As a member of the dioxygenase AlkB family of proteins, FTO depends on Fe ... Weedon MN, Zeggini E, Freathy RM, Lindgren CM et al. A common variant in the fto gene is associated with body mass index and predisposes to childhood and adult obesity.Science. 2007 2007May … WebApr 8, 2024 · Zinc finger CCCH domain-containing protein 13 (ZC3H13) was identified as a nuclear m6A writer gene (Wen et al., 2024). Among the m6A erasers, the first protein identified was fat mass and obesity protein (FTO), an alpha-ketoglutarate-dependent dioxygenase member of the AlkB family that demethylates RNA (Jia et al., 2011).

WebJul 6, 2012 · A total of 68 CCCH genes ( ZmC3H1 - 68) were identified in maize and divided into seven groups by phylogenetic analysis. These 68 genes were found to be unevenly distributed on 10 chromosomes with 15 segmental duplication events, suggesting that segmental duplication played a major role in expansion of the maize CCCH family.

WebJun 9, 2013 · A total of 34 CCCH Znf genes were identified in the latest M. truncatula genome sequence. The 34 predicted members were clustered into nine subfamilies based on their phylogenetic analysis and structure features. In addition, the 34 Medicago CCCH Znf genes were found to be unevenly distributed on eight chromosomes. chef guoWebFeb 25, 2015 · CCCH gene family analysis facilitated functional gene discovery CCCH type Znf proteins share an ancient origin which now can be found in both … chef guo foodtruck menuWebThe CCCH-type zinc finger proteins comprise a large gene family of regulatory proteins and are widely distributed in eukaryotic organisms. The CCCH proteins have been implicated in multiple biological processes and environmental responses in plants. chef guo alexandriaWebJul 6, 2012 · A total of 68 CCCH genes ( ZmC3H1 - 68) were identified in maize and divided into seven groups by phylogenetic analysis. These 68 genes were found to be unevenly … chef gus martinWebDec 27, 2024 · Arabidopsis has 68 CCCH protein genes that are divided into 11 subfamilies [ 23 ]. AtC3H14 (At1G66810) and AtC3H15 … fleet rationalization meaningWebNov 11, 2024 · CCCH-ZFP gene family members were categorised into four groups based on their phylogenetic relationships. Their chromosomal localization, genomic structures … fleet readiness center east addressWeb(Fig. 1C). Detailed information on the maize CCCH zinc finger family can be found in Table S2. To explore sequence characteristics of the most common zinc finger motifs in the maize CCCH gene family, we performed sequence alignments of 45 C-X 7-C-X 5-C-X 3-H motifs and 98 C-X 8-C-X 5-C-X 3-H motifs to generate sequence logos, which were fleet readiness center